CDS

Accession Number TCMCG007C38327
gbkey CDS
Protein Id XP_009150395.1
Location join(18864269..18864467,18864740..18864983,18865058..18865181,18865278..18865334,18865465..18865656,18865733..18865810,18865898..18866080,18866197..18866277,18866425..18866490,18866573..18866665,18866761..18866886,18867003..18867116,18867295..18867390,18867462..18867559,18867628..18868504,18868696..18868791)
Gene LOC103873754
GeneID 103873754
Organism Brassica rapa

Protein

Length 907aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009152147.3
Definition ribonuclease J [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category AK
Description Zn-dependent metallo-hydrolase RNA specificity domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000578        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004527        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008409        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009658        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009798        [VIEW IN EMBL-EBI]
GO:0009880        [VIEW IN EMBL-EBI]
GO:0009914        [VIEW IN EMBL-EBI]
GO:0009942        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0060918        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAACCTGCTGCCTCTTTGCATGGTTACCCTTCTTCCCCTATCTACTTCGATGCTCGCAGACCAGTTCCTACTCCTCCCTCCAAAATGGCAGCTTTCAGTGCTCTATCGCTTTCTCCTTACTCTTTCACCTTCCGACAAAGCTCTCCAGTTAGGTCTACCGTTTCGTGTTCCGTCACTTCTCCTCCTGCCTCTTCTGGTACTTCTTCTTCTTCTTCTTCTTCCAATAAGACACCTCGTAGAAGATCTGGTAGACTAGAAGGAGCGGGGAAAAGCATGGAGGACTCTGTGAAACGTAAAATGGAACAGTTTTATGAAGGAACCGATGGACCTCCGCTCCGTGTCCTTCCCATAGGTGGCCTTGGTGAGATCGGGATGAACTGTATGCTTGTTGGCAACTATGATCGTTACATTCTAATCGACGCCGGTATTATGTTCCCTGATTATGATGACCCTGGGGTCCAGAAAATTATGCCAGACACAGGGTTTATCAGACGATGGAAACACAAGATTGAAGCTGTTGTTATAACGCATGGTCATGAAGATCACATTGGTGCCTTGCCTTGGGTTATCCCAGCTTTGGACTCTAATACACCAATATTCGCATCATCCTTTACCATGGAGCTTATAAAGAAGCGCTTGAAGGAGCATGGGATCTTTGTTCAGTCTAGGCTCAAGACATTTAATACTCGAAGGAGATTTATGGCTGGACCATTTGAAATAGAACCCATTACAGTTACTCACTCTATTCCTGATTGTAGTGGTTTAGTCCTCCGTTGCGCTGATGGTAATATTCTTCACACCGGAGACTGGAAGATTGATGAAGCACCATTGGATGGAAAAGTCTTTGATCGTGAGGCTTTAGAGGAACTCTCTAAGGAAGGAGTCACGTTGATGATGAGTGACTCAACAAATGTATTGTCACCGGGAAGGACAACTAGCGAAAAAGTGGTAGCAGATGCTCTGGTGAGGAATGTAATGGCGGCCAAGGGAAGAGTTATCACAACTCAGTTTGCCTCCAATATACACCGTTTAGGAAGTATTAAGGCTGCTGCTGATTTAACTGGTCGAAAGTTGGTCTTTGTTGGCATGTCCTTGAGGACATATCTAGAAGCAGCTTGGAAGGATGGAAAGGCTCCAATTGACCCGTCAAGTTTGGTGAAAGTTGAAGATATTGAAGCATATTCTCCTAAGGACTTATTGATCGTCACGACTGGATCACAAGCGGAACCACGCGCTGCCCTGAATCTTGCGTCATATGGAAGTAGTCATGCTTTCAAACTTACCAAGGAAGACATAATACTTTACTCAGCCAAGGTAATCCCAGGCAATGAATCAAGAGTAATGAAGATGATGAATCGGTTAGCAGATATCGGTCCAAAAATTGTCATGGGTAAAAATGAAATGCTGCACACATCTGGTCATGCCTACCGTGGAGAGTTGGAAGAGGTTCTTAAAATAGTGAAACCCCAGCATTTTCTCCCCATACATGGAGAACTTTTGTTTCTCAAGGAGCATGAGTTGCTCGGGAAGTCTACTGGGATTCGTCACACTACTGTTATAAAGAATGGAGAGATGCTTGGAGTTTCTCACTTAAGAAATAGAAGAGTTTTGTCCAATGGATTTAGCTCTCTTGGGAGGGAGAACTTGCAGTTAATGTATAGTGACGGTGATAAGGCATTTGGCACAGCAAGTGAACTCTGTATTGACGAGAGACTCAGAATATCATCGGATGGCATTATAGTTCTGAGCATGGAAATCATGCGCCCGGGCGCCTCGGAGAACACTTTGAAAGGGAAGATAAGAATCACAACGCGATGTATGTGGCTTGACAAAGGAAGACTATTAGATGCACTTCACAAGGCAGCACATGCTGCTCTATCAAGTTGTCCTGTGAACTGTCCCTTGTCTCACATGGAAAGAACAGTCTCCGAAGTCCTGAGGAAGATTGTGAGGAAGTACAGTGGTAAAAGGCCTGAAGTCATTGCCATAGCCATGGAAAATCCCATGGCGGTCCGAGCTGATGAGGTCAGTGCGAGGATGTCCGGGGATCCAAATCTTGGCTCTGGAGTTGCAGCGTTAAGGAAAGTTGTGGAAGGAAACCATAAAAGAAACCGAACCAAGAAAGCACCTTCGCAAGAAGAAGCTGGGGAGATAATTGATAGTGCAGGACTACTAGCTGAGGAAGGAACCGCTTCGTCGACATACACAGAAGGTGCTGAAGATGTGCCTGTTCGGAGTTCTTCTGAAGAATCGGATGATTTTTGGAAATCATTCATCAATCCATCATCACCACCTTCACCTGATGAAACCAAAAACGTGGATAAGTCACCTGATGCAGAGACTAAAACAGAGGATAGCGAAAGCAGCAGAGAAGAGGAGGATGATGATAATACATCTGATTCTCAAACCAAGTCGTCAACAAAACGTGTGAGGAGGAACAAATGGAAGCCTGAGGAAGTTAAGAAGGTGATCAGAATGCGTGGAGAGTTGCACAGCAGGTTCCAAGTGGTGAAAGGTAGAATGGCTTTGTGGGAAGAGATCTCTTCAAATCTATCTGCTGAAGGAATCAATCGAAGCCCGGGACAGTGCAAGTCTCTGTGGGCGTCTCTTATTCAGAAATACGAGGAGTGCAAGGCGGATGAAAGAAGCAAGACGAGCTGGTCACATTATGAGGACATGAACAGCATTTTGTCTGAGTTAGACACACCTGCGCCTAAGTAA
Protein:  
MKPAASLHGYPSSPIYFDARRPVPTPPSKMAAFSALSLSPYSFTFRQSSPVRSTVSCSVTSPPASSGTSSSSSSSNKTPRRRSGRLEGAGKSMEDSVKRKMEQFYEGTDGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGIMFPDYDDPGVQKIMPDTGFIRRWKHKIEAVVITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKRLKEHGIFVQSRLKTFNTRRRFMAGPFEIEPITVTHSIPDCSGLVLRCADGNILHTGDWKIDEAPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTTSEKVVADALVRNVMAAKGRVITTQFASNIHRLGSIKAAADLTGRKLVFVGMSLRTYLEAAWKDGKAPIDPSSLVKVEDIEAYSPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLTKEDIILYSAKVIPGNESRVMKMMNRLADIGPKIVMGKNEMLHTSGHAYRGELEEVLKIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFSSLGRENLQLMYSDGDKAFGTASELCIDERLRISSDGIIVLSMEIMRPGASENTLKGKIRITTRCMWLDKGRLLDALHKAAHAALSSCPVNCPLSHMERTVSEVLRKIVRKYSGKRPEVIAIAMENPMAVRADEVSARMSGDPNLGSGVAALRKVVEGNHKRNRTKKAPSQEEAGEIIDSAGLLAEEGTASSTYTEGAEDVPVRSSSEESDDFWKSFINPSSPPSPDETKNVDKSPDAETKTEDSESSREEEDDDNTSDSQTKSSTKRVRRNKWKPEEVKKVIRMRGELHSRFQVVKGRMALWEEISSNLSAEGINRSPGQCKSLWASLIQKYEECKADERSKTSWSHYEDMNSILSELDTPAPK